Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015941051.1_cds_XP_016485075.1_76034
CDS Infomation

[gene=LOC107805531] [db_xref=GeneID:107805531] [protein=zinc finger MYM-type protein 1-like] [protein_id=XP_016485075.1] [location=join(36276..36454,36542..37374,37487..38086,38189..38385)] [gbkey=CDS]
Sequence

ATGATCACGAAATATTTCAAGGCTATTCCAACTCCTCAAAGTTCTGGTTCTGGTTCTAGT
CTTCCTACGCCGAGTTCTTCTCCAAGTCCAATTATTCACGACAATATCAATCCTTTGGCA
GGATCAAACAAAGAGAAAATATTGAATTTGAATCTTGAACCTGATCCCGCAGAAAGAAAT
TTTCCAAAAAGAGATTTTGGTGGATTTATGAGTCAATTTAATCTTGAATGGTTTAACACT
TCATACTCTGGATGGTTAGAATATAGTGTTAAAGTTGATGCAGCATTTTGCTTATGTTGT
TACTTCTTTAAAAATGAGCATGGAGGACATGGAAAAGTTGGGAATTCTTTCACAAAGAGT
GGTTTTAGAATTTGGAATAAAGCTACAGAAAGGCTTAACGCATATATTGGAGAGGTGAAT
AGTCTTCACAATCGGTGTTTTAAGATGATGAGAGATTTAATTAATCAAGAACAATCAATT
CTAATCTCTTTGGACAAGCAATCCAAAAAAATTAAAAGTGATTATCGAGTTCTGTTGAAT
GCTTCGATTGATGTGGCAAGATTTCTTTTAAAACAAGGAATGTCTTTCCGGGGCCATGAT
GAAGGTGAAACTTCTACTAAAAGAGAAAACTTTGTAGAACTCTTACAATGGTATGCAGAT
AGGGATGATGAAGTGAAAAAAGTTGTGCTACAAAGTGCTCCACAAAATAACATGATGATT
GCTCCAAATATCCAAAAAGAGATCGTGAATGCTTGTGCGAAAGAAATAATTAAAGCAATA
GTTGACGATTTAAATAGAGATTACTTTGAAATTTTGGTTGATGAATCTAAGGACGTCTCT
CATAAGGAACAAATGGCTCTTGTTCTGCGGTATGTCAACAAAAAGGGAAAACTTATTGAG
CGATTCCTTAGTATTGTTCATGTTAAAAAAACAACTTCATCGTCATTACAAAAAGCAATC
AATGATTTGTTTTTAGAGCACTCATTGAGTCCATCTCAAATACGGGGACAAGCCGTTGCA
AAAAAATATTATGATGTAGATCATTTTTTTGATATTGTTGCTAATGTCTTTAATATTATT
GGAAGTTCTTTTAAGCGTAGGGATATGCTACGAGAGGATCAGGCAAAACAACTAGAGGAG
CTACAAGTGCTTGGTGAAGTTCATACAGGAAGTGGACTAAATCAAGAACTTGGACTCCAA
AGGCCAGGTGATACCCGATGGGGTTCTCATTTTAAGACAGTGTGTAACTTTATTGCATTA
TTCTCGTCAATCATTAATGTACTTGAGTTTCTTGCAAGTGAGGGTGCAAATTATCTCGAG
AGATCAGTGACAAAAAGTCTAGTGAATGACATAAGATCTTTTGAGTTTGTGCATATGATG
CATTTGATGTTAAAATTATTAGCAATCATAAATGAGTTGAATATAGCTTTGCAAAGAAAA
GATCAGGATATTGTAAATGCTATGAAGCTTGTTGGTTTCGCCAAGAGGCAATTGCAAGTG
ATGAGAGAATTTAAATGGGAATCTTTGATAGATAACGCCTCTTCATTTTGTTCCAAGCAT
GATATTGTGATCCCTGAAATGGATAAGAACTATCATCTTGGAAAGTCAAAGCTGAATAGT
AATCTACTTCTTGGTATAGCTAGTTTGAGTCCGGATAATTCTTTTGCAAATTATGATAAA
GACAGAATTATGAAACTTGCTACACTTTATCCTCATGAGTTTAGTGGTTCAAAACTTGAA
GATCTCAGTTACGAGCTTGATAACTATATTCTCTTTGTGAAAGAAGACAATGATTTCTCT
AACTTGTGA

Peptide Sequence

PEP ID

XP_016485075.1
PEP Infomation

PREDICTED: zinc finger MYM-type protein 1-like [Nicotiana tabacum]
Sequence

MITKYFKAIPTPQSSGSGSSLPTPSSSPSPIIHDNINPLAGSNKEKILNLNLEPDPAERN
FPKRDFGGFMSQFNLEWFNTSYSGWLEYSVKVDAAFCLCCYFFKNEHGGHGKVGNSFTKS
GFRIWNKATERLNAYIGEVNSLHNRCFKMMRDLINQEQSILISLDKQSKKIKSDYRVLLN
ASIDVARFLLKQGMSFRGHDEGETSTKRENFVELLQWYADRDDEVKKVVLQSAPQNNMMI
APNIQKEIVNACAKEIIKAIVDDLNRDYFEILVDESKDVSHKEQMALVLRYVNKKGKLIE
RFLSIVHVKKTTSSSLQKAINDLFLEHSLSPSQIRGQAVAKKYYDVDHFFDIVANVFNII
GSSFKRRDMLREDQAKQLEELQVLGEVHTGSGLNQELGLQRPGDTRWGSHFKTVCNFIAL
FSSIINVLEFLASEGANYLERSVTKSLVNDIRSFEFVHMMHLMLKLLAIINELNIALQRK
DQDIVNAMKLVGFAKRQLQVMREFKWESLIDNASSFCSKHDIVIPEMDKNYHLGKSKLNS
NLLLGIASLSPDNSFANYDKDRIMKLATLYPHEFSGSKLEDLSYELDNYILFVKEDNDFS
NL

Transcript Sequence

Gene sequence data has not been registered.